[vhcook]

Ok, you'll want to go to the project explorer and at the bottom there should be an item called build specifications. Expand that, and you'll find one thing under it (can't remember what the text will read, as I don't have labview on this computer). Right click on that item and select "build" from the menu. There will be a bit of a wait for that to complete. When it does, right click it again and choose "run as startup". It will deploy your code to the robot and then ask you if you want to reboot the cRIO now. You do.

When it reboots it will have the code running and will use that code until you repeat this process with another build.

I hope this helps.