From posting in another thread, I have found the conclusion this must be answered by the GDC. In the manual regarding scoring it is currently to vague and open to misinterpretation.
Quote:
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<G66>if three LOGO PIECES form a LOGO, the assigned points from the SCORING PEGS in that row of that SCORING GRID are given as an additional LOGO BONUS
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<G66> "assigned points" seems confusing on what it is defined as? all points assigned to the peg (meaning uber tubes count)? or is it all points from the peg score (meaning uber tubes aren't doubled by logo points)?