Our Crio Won't Run deployed Code and there are no Error messages

[JoCo909]

Hi. I've been browsing around the forums and I noticed this thread. Our problem is very similar to this, with some minor differences. We have built and deployed a code for doing multiple things (using C++), and it has deployed fine with no error codes, no indication that anything was wrong. However, we noticed that our alterations to the code do absolutely nothing. We essentially commented out almost the entire code, built and deployed it, and yet it still ran (ex: we commented out our joystick control [2 joys, tank drive setup] and yet when moving the joysticks the robot still drove even when there was no drive built in). All our PWM connections look fine and react perfectly normal, it just seems like the code we're deploying to the robot simply isn't being implemented. Thoughts?